BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H08SP1|AL427685
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1571 1904 0.0
>3x_Contig1571
Length = 13536
Score = 1904 bits (960), Expect = 0.0
Identities = 963/965 (99%)
Strand = Plus / Plus
Query: 1 acacgaggatcaccgactagataatatacatcgtaaaagtatctgactgacaaaagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 acacgaggatcaccgactagataatatacatcgtaaaagtatctgactgacaaaagcaca 5043
Query: 61 gtatgcaaaatagtataccccaaaatggctaacgtctccaatctagtcgggatcatacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5044 gtatgcaaaatagtataccccaaaatggctaacgtctccaatctagtcgggatcatacca 5103
Query: 121 aaatagaatggccatccaataggggtggaatggttatgcaataaagcaggtataacgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5104 aaatagaatggccatccaataggggtggaatggttatgcaataaagcaggtataacgata 5163
Query: 181 cggccatcaacaatggtgaagaattttgatttcatccaatctcttgagcgagggtaccgn 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5164 cggccatcaacaatggtgaagaattttgatttcatccaatctcttgagcgagggtaccga 5223
Query: 241 agtaataatttgtagatggcagcaatacataagaccaaaatccaataaccacatagaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5224 agtaataatttgtagatggcagcaatacataagaccaaaatccaataaccacatagaatg 5283
Query: 301 aacccaccaatggtactgaaatcaagattatgcactggcccataataggccatcaataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5284 aacccaccaatggtactgaaatcaagattatgcactggcccataataggccatcaataaa 5343
Query: 361 taattgagtttggattctaaaccgttgattggagcatatagagttgtcttttcactttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5344 taattgagtttggattctaaaccgttgattggagcatatagagttgtcttttcactttta 5403
Query: 421 ggaaatggttgtatatgcgacgtcgcgttttcaatctttaccaagatatctccaccagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5404 ggaaatggttgtatatgcgacgtcgcgttttcaatctttaccaagatatctccaccagtt 5463
Query: 481 agaggtgatattggatttttaccaccccaattttgctcacaagctgaattgaccctttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5464 agaggtgatattggatttttaccaccccaattttgctcacaagctgaattgaccctttca 5523
Query: 541 gctataacatccaggagcttaatatcgtcttctgattttggatacttacctttcttcctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5524 gctataacatccaggagcttaatatcgtcttctgattttggatacttacctttcttcctt 5583
Query: 601 agcatgtcacgtgcgcatgatacccaggtttccattgcaggttcgtataggcatgcggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5584 agcatgtcacgtgcgcatgatacccaggtttccattgcaggttcgtataggcatgcggct 5643
Query: 661 ctcaaactccgacgttgcaaaaggaaagatccgtgagtcgaagcaagagtctcgagttcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5644 ctcaaactccgacgttgcaaaaggaaagatccgtgagtcgaagcaagagtctcgagttcg 5703
Query: 721 aacgcccattgatgatcttttacatccttcaagcatgcagaagaggaaagatgtacccag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5704 aacgcccattgatgatcttttacatccttcaagcatgcagaagaggaaagatgtacccag 5763
Query: 781 ttagtatgccatctggtaggcttgaatagattaaagggcacagctgaagcagtatcagct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5764 ttagtatgccatctggtaggcttgaatagattaaagggcacagctgaagcagtatcagct 5823
Query: 841 agagacagacaccagaccaaaaacaccaacaggtttatctgcattgtgttttctattctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5824 agagacagacaccagaccaaaaacaccaacaggtttatctgcattgtgttttctattctc 5883
Query: 901 ttaatttctacttcaactgttattcactttaacactgtatgaatttgaattgtgaactga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5884 ttaatttctacttcaactgttattcactttaacactgtatgaatttgaattgtgaactga 5943
Query: 961 awtac 965
| |||
Sbjct: 5944 attac 5948
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6873
Number of Sequences: 1807
Number of extensions: 6873
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)